| Clone() const=0 | gnBaseSource | [pure virtual] |
| Close()=0 | gnBaseSource | [pure virtual] |
| GetContigID(const string &name) const=0 | gnBaseSource | [pure virtual] |
| GetContigListLength() const=0 | gnBaseSource | [pure virtual] |
| GetContigName(const uint32 i) const=0 | gnBaseSource | [pure virtual] |
| GetContigSeqLength(const uint32 i) const=0 | gnBaseSource | [pure virtual] |
| GetFilter() const=0 | gnBaseSource | [pure virtual] |
| GetOpenString() const=0 | gnBaseSource | [pure virtual] |
| GetSpec() const=0 | gnBaseSource | [pure virtual] |
| gnBaseSource() | gnBaseSource | [inline] |
| gnClone() | gnClone | [inline] |
| HasContig(const string &name) const=0 | gnBaseSource | [pure virtual] |
| Open(string openString)=0 | gnBaseSource | [pure virtual] |
| Open()=0 | gnBaseSource | [pure virtual] |
| Read(const uint64 pos, char *buf, gnSeqI &bufLen)=0 | gnBaseSource | [pure virtual] |
| SeqRead(const gnSeqI start, char *buf, gnSeqI &bufLen, const uint32 contigI=ALL_CONTIGS)=0 | gnBaseSource | [pure virtual] |
| SetFilter(gnFilter *filter)=0 | gnBaseSource | [pure virtual] |
| ~gnBaseSource() | gnBaseSource | [inline, virtual] |
| ~gnClone() | gnClone | [inline, virtual] |
1.3-rc3